PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_175E7FC38.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 337aa    MW: 36164.9 Da    PI: 7.7253
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_175E7FC38.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY673e-21133197359
                            -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT.....EEEEEEES--SS- CS
                   WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk.....vveitYegeHnhe 59 
                            Dgy+WrKYGqK+++ +++pr+YYrCt +   gCp+k+ v+r+++d++       +++Y +eH ++
  Traes_5BL_175E7FC38.1 133 DGYQWRKYGQKQIEAAKHPRNYYRCTNStnqGCPAKRTVQRNDDDGSddgrpKYTVVYISEHSCK 197
                            9************************9888889**********99986444446889999999886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.5E-23117198IPR003657WRKY domain
SuperFamilySSF1182908.63E-21125198IPR003657WRKY domain
SMARTSM007744.6E-28131198IPR003657WRKY domain
PROSITE profilePS5081119.141133177IPR003657WRKY domain
PfamPF031061.7E-22133197IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MQRSRGCAPG GEHGWAAADG GMQLQRRERE LVAQLHELLF PSTSPSRSGA SSCSGPAADL  60
YWEHGSPQVK ATASCGGGKR RGGRKRVRED ERHEEGQGQR GGAAPATKAT TRCRRKKQGA  120
TTTTLVTTVP DFDGYQWRKY GQKQIEAAKH PRNYYRCTNS TNQGCPAKRT VQRNDDDGSD  180
DGRPKYTVVY ISEHSCKATE SAAVPVILET TVRTDTAAAP NVAVVPGSRS GAISSETQSP  240
ASSSDITWSS GGSDGGANVP PRERDDYSRM FAIEDDCWGW NASPPAPAAA AALLQEMDFD  300
GPIRSPVHVA AADGSWINDL FVNEPPFVLN SCHLFGL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6696620.0EU669662.1 Triticum aestivum WRKY32 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010238804.12e-82PREDICTED: probable WRKY transcription factor 29
TrEMBLW5F8040.0W5F804_WHEAT; Uncharacterized protein
STRINGMLOC_68369.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.25e-14WRKY DNA-binding protein 67
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]